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Phys. Rev. Lett. 100, 018103 (2008) [4 pages]

Transmembrane Helix Tilting: Insights from Calculating the Potential of Mean Force

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Jinhyuk Lee and Wonpil Im*
Department of Molecular Biosciences and Center for Bioinformatics, The University of Kansas, 2030 Becker Drive, Lawrence, Kansas 66047, USA

Received 5 June 2007; published 8 January 2008

To explore the microscopic forces governing the helix tilting in membranes, we have calculated the potential of mean force (PMF) as a function of tilt angle (τ) of WALP19, a transmembrane model peptide, in a dimyristoylphosphatidylcholine membrane. The PMF shows a wide range of thermally accessible tilt angles (5° to 22°) with a minimum at τ=12.5°. The free energy decomposition reveals that the helix tilting up to τ=12.5° is mostly driven by the entropy contribution arising from the helix precession around the membrane normal, whereas the PMF increase after τ=12.5° results from helical deformation due to the sequence-specific helix-lipid interactions.

© 2008 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevLett.100.018103
DOI:
10.1103/PhysRevLett.100.018103
PACS:
87.15.K−

*wonpil@ku.edu