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Phys. Rev. Lett. 100, 180602 (2008) [4 pages]

Optimized Free Energies from Bidirectional Single-Molecule Force Spectroscopy

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David D. L. Minh* and Artur B. Adib
Laboratory of Chemical Physics, NIDDK, National Institutes of Health, Bethesda, Maryland 20892, USA

Received 6 February 2008; published 6 May 2008

An optimized method for estimating path-ensemble averages using data from processes driven in opposite directions is presented. Based on this estimator, bidirectional expressions for reconstructing free energies and potentials of mean force from single-molecule force spectroscopy—valid for biasing potentials of arbitrary stiffness—are developed. Numerical simulations on a model potential indicate that these methods perform better than unidirectional strategies.

© 2008 The American Physical Society

URL:
http://link.aps.org/doi/10.1103/PhysRevLett.100.180602
DOI:
10.1103/PhysRevLett.100.180602
PACS:
05.70.Ln

*daveminh@gmail.com